Summary
- Splice variants
- Transcript comparison
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Gene: 1700001L05Rik ENSMUSG00000075511

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Description

RIKEN cDNA 1700001L05 gene [Source:MGI Symbol;Acc:MGI:1916541]

Location

Chromosome 15: 83,238,048-83,251,590 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 14 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000178628.9	1700001L05Rik-203	4969	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000247446.2	1700001L05Rik-205	2316	No protein	-	lncRNA		-
ENSMUST00000100370.3	1700001L05Rik-201	2298	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000177890.3	1700001L05Rik-202	2202	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000335644.1	1700001L05Rik-208	1721	No protein	-	lncRNA		-
ENSMUST00000335642.1	1700001L05Rik-206	1636	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000335643.1	1700001L05Rik-207	1550	No protein	-	lncRNA		-
ENSMUST00000335648.1	1700001L05Rik-212	1465	No protein	-	lncRNA		-
ENSMUST00000335646.1	1700001L05Rik-210	1409	No protein	-	lncRNA		-
ENSMUST00000335647.1	1700001L05Rik-211	1372	No protein	-	lncRNA		-
ENSMUST00000179705.2	1700001L05Rik-204	1260	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000335645.1	1700001L05Rik-209	929	No protein	-	lncRNA		-
ENSMUST00000335650.1	1700001L05Rik-214	863	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000335649.1	1700001L05Rik-213	788	No protein	-	lncRNA		-

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Summary

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