Gene: 1700001G01Rik ENSMUSG00000087170

Description

RIKEN cDNA 1700001G01 gene [Source:MGI Symbol;Acc:MGI:1922683]

Location

Chromosome 18: 17,152,089-17,271,170 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 51 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000147119.9	1700001G01Rik-203	1203	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000125117.2	1700001G01Rik-201	1562	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000313945.1	1700001G01Rik-205	1552	No protein	-	lncRNA	-
ENSMUST00000313981.1	1700001G01Rik-241	1445	No protein	-	lncRNA	-
ENSMUST00000313982.1	1700001G01Rik-242	1416	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313957.1	1700001G01Rik-217	1388	No protein	-	lncRNA	-
ENSMUST00000313977.1	1700001G01Rik-237	1341	No protein	-	lncRNA	-
ENSMUST00000313954.1	1700001G01Rik-214	1243	No protein	-	lncRNA	-
ENSMUST00000313975.1	1700001G01Rik-235	1216	No protein	-	lncRNA	-
ENSMUST00000313955.1	1700001G01Rik-215	1159	No protein	-	lncRNA	-
ENSMUST00000313971.1	1700001G01Rik-231	1149	No protein	-	lncRNA	-
ENSMUST00000313976.1	1700001G01Rik-236	1149	No protein	-	lncRNA	-
ENSMUST00000313951.1	1700001G01Rik-211	1147	No protein	-	lncRNA	-
ENSMUST00000313984.1	1700001G01Rik-244	1147	No protein	-	lncRNA	-
ENSMUST00000313948.1	1700001G01Rik-208	1143	No protein	-	lncRNA	-
ENSMUST00000313960.1	1700001G01Rik-220	1136	No protein	-	lncRNA	-
ENSMUST00000313968.1	1700001G01Rik-228	1105	No protein	-	lncRNA	-
ENSMUST00000313985.1	1700001G01Rik-245	1100	No protein	-	lncRNA	-
ENSMUST00000313965.1	1700001G01Rik-225	1087	No protein	-	lncRNA	-
ENSMUST00000313974.1	1700001G01Rik-234	1082	No protein	-	lncRNA	-
ENSMUST00000313959.1	1700001G01Rik-219	1058	No protein	-	lncRNA	-
ENSMUST00000313983.1	1700001G01Rik-243	1045	No protein	-	lncRNA	-
ENSMUST00000313956.1	1700001G01Rik-216	1038	No protein	-	lncRNA	-
ENSMUST00000313953.1	1700001G01Rik-213	1032	No protein	-	lncRNA	-
ENSMUST00000313950.1	1700001G01Rik-210	1029	No protein	-	lncRNA	-
ENSMUST00000313947.1	1700001G01Rik-207	982	No protein	-	lncRNA	-
ENSMUST00000136956.3	1700001G01Rik-202	967	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000313990.1	1700001G01Rik-250	959	No protein	-	lncRNA	-
ENSMUST00000313970.1	1700001G01Rik-230	957	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313961.1	1700001G01Rik-221	952	No protein	-	lncRNA	-
ENSMUST00000313962.1	1700001G01Rik-222	930	No protein	-	lncRNA	-
ENSMUST00000153022.8	1700001G01Rik-204	928	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000313952.1	1700001G01Rik-212	915	No protein	-	lncRNA	-
ENSMUST00000313986.1	1700001G01Rik-246	915	No protein	-	lncRNA	-
ENSMUST00000313958.1	1700001G01Rik-218	892	No protein	-	lncRNA	-
ENSMUST00000313946.1	1700001G01Rik-206	885	No protein	-	lncRNA	-
ENSMUST00000313966.1	1700001G01Rik-226	878	No protein	-	lncRNA	-
ENSMUST00000313964.1	1700001G01Rik-224	827	No protein	-	lncRNA	-
ENSMUST00000313963.1	1700001G01Rik-223	807	No protein	-	lncRNA	-
ENSMUST00000313967.1	1700001G01Rik-227	767	No protein	-	lncRNA	-
ENSMUST00000313949.1	1700001G01Rik-209	743	No protein	-	lncRNA	-
ENSMUST00000313989.1	1700001G01Rik-249	725	No protein	-	lncRNA	-
ENSMUST00000313991.1	1700001G01Rik-251	693	No protein	-	lncRNA	-
ENSMUST00000313978.1	1700001G01Rik-238	689	No protein	-	lncRNA	-
ENSMUST00000313979.1	1700001G01Rik-239	684	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313969.1	1700001G01Rik-229	659	No protein	-	lncRNA	-
ENSMUST00000313987.1	1700001G01Rik-247	603	No protein	-	lncRNA	-
ENSMUST00000313973.1	1700001G01Rik-233	482	No protein	-	lncRNA	-
ENSMUST00000313972.1	1700001G01Rik-232	455	No protein	-	lncRNA	-
ENSMUST00000313980.1	1700001G01Rik-240	393	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000313988.1	1700001G01Rik-248	384	No protein	-	lncRNA	-

Gene: 1700001G01Rik ENSMUSG00000087170

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Gene: 1700001G01Rik ENSMUSG00000087170

Summary

About Us

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