Description

protocadherin alpha 10 [Source:MGI Symbol;Acc:MGI:1298408]

Location
INSDC coordinates

chromosome:GRCm38:CM001011.2:36930285:37187657:1

Transcripts



This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Pcdha10-202ENSMUST0000004747954221006 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29168Q8BRP3 Q8K488 Q91Y09
NM_001003672
NP_001003672
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI2APPRIS candidate principal isoform (longest CCDS) [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Pcdha10-207ENSMUST000001156595341979 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37777Q8BRP3 Q8K488 Q91Y11
NM_138661
NP_619602
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-201ENSMUST000000075845296964 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29167Q8BRP3 Q8K488 Q91Y10
NM_001003671
NP_001003671
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-203ENSMUST000000476145254950 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29166Q8BRP3 Q8K488 Q91Y18
NM_138663
NP_619604
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Pcdha10-205ENSMUST000001156575254950 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37779Q8BRP3 Q8K488 Q91Y19
NM_009960
NP_034090
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-206ENSMUST000001156585242946 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37778Q8BRP3 Q8K488 Q91Y20
NM_009961
NP_034091
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-204ENSMUST000000707972847948 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37774Q8BRP3 Q8K488 Q91Y21
NM_054072
NP_473413
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-209ENSMUST000001156622847948 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37775B5AK96 Q8BRP3 Q8K488
Q91Y17
NM_198117
NP_932785
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdha10-208ENSMUST000001156612844947 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37776O88689 Q8BRP3 Q8K488
NM_007766
NP_031792
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays