Gene: Hdnr ENSMUSG00000097910

Description

Hand2 downstream lncRNA [Source:MGI Symbol;Acc:MGI:1923246]

Gene Synonyms

5033428I22Rik, Handlr, Hdn, handsdown

Location

Chromosome 8: 57,784,724-57,868,145 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 166 transcripts (splice variants) and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000257244.1	Hdnr-238	652	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000210633.3	Hdnr-204	6713	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000209896.3	Hdnr-202	3410	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000243380.2	Hdnr-216	2602	No protein	-	lncRNA	-
ENSMUST00000257355.1	Hdnr-348	2458	No protein	-	lncRNA	-
ENSMUST00000257311.1	Hdnr-305	2419	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181638.3	Hdnr-201	2289	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000257356.1	Hdnr-349	2250	No protein	-	lncRNA	-
ENSMUST00000246558.2	Hdnr-235	2157	No protein	-	lncRNA	-
ENSMUST00000257313.1	Hdnr-307	2152	No protein	-	lncRNA	-
ENSMUST00000257354.1	Hdnr-347	2107	No protein	-	lncRNA	-
ENSMUST00000257359.1	Hdnr-351	2046	No protein	-	lncRNA	-
ENSMUST00000257291.1	Hdnr-285	2041	No protein	-	lncRNA	-
ENSMUST00000245462.2	Hdnr-228	2020	No protein	-	lncRNA	-
ENSMUST00000243607.1	Hdnr-217	1957	No protein	-	lncRNA	-
ENSMUST00000244538.1	Hdnr-224	1906	No protein	-	lncRNA	-
ENSMUST00000257358.1	Hdnr-350	1872	No protein	-	lncRNA	-
ENSMUST00000257334.1	Hdnr-328	1862	No protein	-	lncRNA	-
ENSMUST00000243887.2	Hdnr-218	1858	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242753.2	Hdnr-213	1856	No protein	-	lncRNA	-
ENSMUST00000257336.1	Hdnr-330	1796	No protein	-	lncRNA	-
ENSMUST00000245943.2	Hdnr-233	1758	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245855.2	Hdnr-230	1688	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244833.2	Hdnr-226	1683	No protein	-	lncRNA	-
ENSMUST00000257289.1	Hdnr-283	1681	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241577.1	Hdnr-208	1531	No protein	-	lncRNA	-
ENSMUST00000244823.1	Hdnr-225	1505	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257317.1	Hdnr-311	1496	No protein	-	lncRNA	-
ENSMUST00000243053.2	Hdnr-214	1485	No protein	-	lncRNA	-
ENSMUST00000257274.1	Hdnr-268	1469	No protein	-	lncRNA	-
ENSMUST00000257297.1	Hdnr-291	1467	No protein	-	lncRNA	-
ENSMUST00000257293.1	Hdnr-287	1448	No protein	-	lncRNA	-
ENSMUST00000257318.1	Hdnr-312	1440	No protein	-	lncRNA	-
ENSMUST00000244109.2	Hdnr-220	1431	No protein	-	lncRNA	-
ENSMUST00000257314.1	Hdnr-308	1419	No protein	-	lncRNA	-
ENSMUST00000257299.1	Hdnr-293	1410	No protein	-	lncRNA	-
ENSMUST00000257325.1	Hdnr-319	1406	No protein	-	lncRNA	-
ENSMUST00000246904.2	Hdnr-236	1400	No protein	-	lncRNA	-
ENSMUST00000257316.1	Hdnr-310	1393	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257323.1	Hdnr-317	1386	No protein	-	lncRNA	-
ENSMUST00000244167.1	Hdnr-221	1379	No protein	-	lncRNA	-
ENSMUST00000257332.1	Hdnr-326	1352	No protein	-	lncRNA	-
ENSMUST00000257366.1	Hdnr-358	1350	No protein	-	lncRNA	-
ENSMUST00000245622.2	Hdnr-229	1345	No protein	-	lncRNA	-
ENSMUST00000257312.1	Hdnr-306	1345	No protein	-	lncRNA	-
ENSMUST00000257315.1	Hdnr-309	1341	No protein	-	lncRNA	-
ENSMUST00000246078.2	Hdnr-234	1325	No protein	-	lncRNA	-
ENSMUST00000245933.1	Hdnr-232	1304	No protein	-	lncRNA	-
ENSMUST00000257326.1	Hdnr-320	1291	No protein	-	lncRNA	-
ENSMUST00000257333.1	Hdnr-327	1280	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257337.1	Hdnr-331	1250	No protein	-	lncRNA	-
ENSMUST00000257329.1	Hdnr-323	1233	No protein	-	lncRNA	-
ENSMUST00000257327.1	Hdnr-321	1220	No protein	-	lncRNA	-
ENSMUST00000257328.1	Hdnr-322	1212	No protein	-	lncRNA	-
ENSMUST00000242179.2	Hdnr-210	1210	No protein	-	lncRNA	-
ENSMUST00000242305.2	Hdnr-211	1205	No protein	-	lncRNA	-
ENSMUST00000257320.1	Hdnr-314	1203	No protein	-	lncRNA	-
ENSMUST00000257368.1	Hdnr-360	1203	No protein	-	lncRNA	-
ENSMUST00000257321.1	Hdnr-315	1200	No protein	-	lncRNA	-
ENSMUST00000244499.2	Hdnr-223	1188	No protein	-	lncRNA	-
ENSMUST00000245275.2	Hdnr-227	1178	No protein	-	lncRNA	-
ENSMUST00000241267.2	Hdnr-206	1172	No protein	-	lncRNA	-
ENSMUST00000257343.1	Hdnr-336	1142	No protein	-	lncRNA	-
ENSMUST00000257302.1	Hdnr-296	1141	No protein	-	lncRNA	-
ENSMUST00000257248.1	Hdnr-242	1136	No protein	-	lncRNA	-
ENSMUST00000257287.1	Hdnr-281	1117	No protein	-	lncRNA	-
ENSMUST00000257330.1	Hdnr-324	1115	No protein	-	lncRNA	-
ENSMUST00000257322.1	Hdnr-316	1112	No protein	-	lncRNA	-
ENSMUST00000257346.1	Hdnr-339	1101	No protein	-	lncRNA	-
ENSMUST00000250194.1	Hdnr-237	1093	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257284.1	Hdnr-278	1091	No protein	-	lncRNA	-
ENSMUST00000241704.2	Hdnr-209	1088	No protein	-	lncRNA	-
ENSMUST00000257319.1	Hdnr-313	1080	No protein	-	lncRNA	-
ENSMUST00000242398.2	Hdnr-212	1079	No protein	-	lncRNA	-
ENSMUST00000257275.1	Hdnr-269	1067	No protein	-	lncRNA	-
ENSMUST00000257268.1	Hdnr-262	1053	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257292.1	Hdnr-286	1052	No protein	-	lncRNA	-
ENSMUST00000257252.1	Hdnr-246	1023	No protein	-	lncRNA	-
ENSMUST00000257295.1	Hdnr-289	1023	No protein	-	lncRNA	-
ENSMUST00000257342.1	Hdnr-335	1022	No protein	-	lncRNA	-
ENSMUST00000257365.1	Hdnr-357	1022	No protein	-	lncRNA	-
ENSMUST00000257364.1	Hdnr-356	1018	No protein	-	lncRNA	-
ENSMUST00000257339.1	Hdnr-333	1017	No protein	-	lncRNA	-
ENSMUST00000244174.1	Hdnr-222	1016	No protein	-	lncRNA	-
ENSMUST00000210614.4	Hdnr-203	1013	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000257340.1	Hdnr-334	1007	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257338.1	Hdnr-332	1001	No protein	-	lncRNA	-
ENSMUST00000257282.1	Hdnr-276	982	No protein	-	lncRNA	-
ENSMUST00000243154.1	Hdnr-215	961	No protein	-	lncRNA	-
ENSMUST00000257285.1	Hdnr-279	961	No protein	-	lncRNA	-
ENSMUST00000257300.1	Hdnr-294	959	No protein	-	lncRNA	-
ENSMUST00000257306.1	Hdnr-300	957	No protein	-	lncRNA	-
ENSMUST00000257309.1	Hdnr-303	957	No protein	-	lncRNA	-
ENSMUST00000245873.1	Hdnr-231	935	No protein	-	lncRNA	-
ENSMUST00000257324.1	Hdnr-318	933	No protein	-	lncRNA	-
ENSMUST00000241412.2	Hdnr-207	920	No protein	-	lncRNA	-
ENSMUST00000257371.1	Hdnr-363	914	No protein	-	lncRNA	-
ENSMUST00000244027.2	Hdnr-219	913	No protein	-	lncRNA	-
ENSMUST00000257344.1	Hdnr-337	912	No protein	-	lncRNA	-
ENSMUST00000257281.1	Hdnr-275	900	No protein	-	lncRNA	-
ENSMUST00000257288.1	Hdnr-282	896	No protein	-	lncRNA	-
ENSMUST00000257296.1	Hdnr-290	894	No protein	-	lncRNA	-
ENSMUST00000257335.1	Hdnr-329	889	No protein	-	lncRNA	-
ENSMUST00000257267.1	Hdnr-261	874	No protein	-	lncRNA	-
ENSMUST00000257363.1	Hdnr-355	871	No protein	-	lncRNA	-
ENSMUST00000257251.1	Hdnr-245	870	No protein	-	lncRNA	-
ENSMUST00000257269.1	Hdnr-263	857	No protein	-	lncRNA	-
ENSMUST00000257310.1	Hdnr-304	838	No protein	-	lncRNA	-
ENSMUST00000257350.1	Hdnr-343	832	No protein	-	lncRNA	-
ENSMUST00000257279.1	Hdnr-273	830	No protein	-	lncRNA	-
ENSMUST00000257303.1	Hdnr-297	829	No protein	-	lncRNA	-
ENSMUST00000257277.1	Hdnr-271	826	No protein	-	lncRNA	-
ENSMUST00000257370.1	Hdnr-362	824	No protein	-	lncRNA	-
ENSMUST00000257304.1	Hdnr-298	823	No protein	-	lncRNA	-
ENSMUST00000257247.1	Hdnr-241	806	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257353.1	Hdnr-346	804	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257263.1	Hdnr-257	791	No protein	-	lncRNA	-
ENSMUST00000211592.3	Hdnr-205	775	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000257255.1	Hdnr-249	771	No protein	-	lncRNA	-
ENSMUST00000257265.1	Hdnr-259	767	No protein	-	lncRNA	-
ENSMUST00000257254.1	Hdnr-248	755	No protein	-	lncRNA	-
ENSMUST00000257273.1	Hdnr-267	755	No protein	-	lncRNA	-
ENSMUST00000257249.1	Hdnr-243	753	No protein	-	lncRNA	-
ENSMUST00000257372.1	Hdnr-364	752	No protein	-	lncRNA	-
ENSMUST00000257259.1	Hdnr-253	748	No protein	-	lncRNA	-
ENSMUST00000257305.1	Hdnr-299	734	No protein	-	lncRNA	-
ENSMUST00000257362.1	Hdnr-354	730	No protein	-	lncRNA	-
ENSMUST00000257347.1	Hdnr-340	726	No protein	-	lncRNA	-
ENSMUST00000257253.1	Hdnr-247	725	No protein	-	lncRNA	-
ENSMUST00000257345.1	Hdnr-338	716	No protein	-	lncRNA	-
ENSMUST00000257270.1	Hdnr-264	715	No protein	-	lncRNA	-
ENSMUST00000257246.1	Hdnr-240	711	No protein	-	lncRNA	-
ENSMUST00000257278.1	Hdnr-272	707	No protein	-	lncRNA	-
ENSMUST00000257271.1	Hdnr-265	697	No protein	-	lncRNA	-
ENSMUST00000257245.1	Hdnr-239	693	No protein	-	lncRNA	-
ENSMUST00000257262.1	Hdnr-256	688	No protein	-	lncRNA	-
ENSMUST00000257272.1	Hdnr-266	686	No protein	-	lncRNA	-
ENSMUST00000257298.1	Hdnr-292	684	No protein	-	lncRNA	-
ENSMUST00000257256.1	Hdnr-250	679	No protein	-	lncRNA	-
ENSMUST00000257307.1	Hdnr-301	677	No protein	-	lncRNA	-
ENSMUST00000257250.1	Hdnr-244	669	No protein	-	lncRNA	-
ENSMUST00000257276.1	Hdnr-270	666	No protein	-	lncRNA	-
ENSMUST00000257286.1	Hdnr-280	651	No protein	-	lncRNA	-
ENSMUST00000257258.1	Hdnr-252	648	No protein	-	lncRNA	-
ENSMUST00000257361.1	Hdnr-353	644	No protein	-	lncRNA	-
ENSMUST00000257373.1	Hdnr-365	644	No protein	-	lncRNA	-
ENSMUST00000257260.1	Hdnr-254	638	No protein	-	lncRNA	-
ENSMUST00000257348.1	Hdnr-341	595	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257264.1	Hdnr-258	590	No protein	-	lncRNA	-
ENSMUST00000257266.1	Hdnr-260	578	No protein	-	lncRNA	-
ENSMUST00000257257.1	Hdnr-251	576	No protein	-	lncRNA	-
ENSMUST00000257369.1	Hdnr-361	555	No protein	-	lncRNA	-
ENSMUST00000257294.1	Hdnr-288	554	No protein	-	lncRNA	-
ENSMUST00000257360.1	Hdnr-352	535	No protein	-	lncRNA	-
ENSMUST00000257352.1	Hdnr-345	515	No protein	-	lncRNA	-
ENSMUST00000257280.1	Hdnr-274	487	No protein	-	lncRNA	-
ENSMUST00000257283.1	Hdnr-277	471	No protein	-	lncRNA	-
ENSMUST00000257261.1	Hdnr-255	449	No protein	-	lncRNA	-
ENSMUST00000257374.1	Hdnr-366	426	No protein	-	lncRNA	-
ENSMUST00000257367.1	Hdnr-359	421	No protein	-	lncRNA	-
ENSMUST00000257308.1	Hdnr-302	408	No protein	-	lncRNA	-
ENSMUST00000257351.1	Hdnr-344	402	No protein	-	lncRNA	-
ENSMUST00000257290.1	Hdnr-284	373	No protein	-	lncRNA	-
ENSMUST00000257331.1	Hdnr-325	324	No protein	-	lncRNA	-
ENSMUST00000257349.1	Hdnr-342	295	No protein	-	lncRNA	-
ENSMUST00000257301.1	Hdnr-295	277	No protein	-	lncRNA	-

Gene: Hdnr ENSMUSG00000097910

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Hdnr ENSMUSG00000097910

Summary

About Us

Get help

Our sister sites

Follow us