Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: ENSMUSG00000143161

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Description

novel transcript

Location

Chromosome 13: 68,375,596-68,384,306 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000375067.1	-	1593	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000375078.1	-	4462	No protein	-	lncRNA		-
ENSMUST00000375077.1	-	3346	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375069.1	-	2628	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375073.1	-	2507	No protein	-	lncRNA		-
ENSMUST00000375082.1	-	2374	No protein	-	lncRNA		-
ENSMUST00000375083.1	-	2367	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375072.1	-	2174	No protein	-	lncRNA		-
ENSMUST00000375070.1	-	1973	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375071.1	-	1901	No protein	-	lncRNA		-
ENSMUST00000375068.1	-	1894	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375076.1	-	1787	No protein	-	lncRNA		-
ENSMUST00000375075.1	-	1679	No protein	-	lncRNA		-
ENSMUST00000375074.1	-	1547	No protein	-	lncRNA		-
ENSMUST00000375079.1	-	1446	No protein	-	lncRNA		-
ENSMUST00000375085.1	-	1273	No protein	-	lncRNA		-
ENSMUST00000375084.1	-	824	No protein	-	lncRNA		-
ENSMUST00000375081.1	-	588	No protein	-	lncRNA		-
ENSMUST00000375080.1	-	454	No protein	-	lncRNA		-

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Summary

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