Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: 4930542C21Rik ENSMUSG00000142580

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Description

RIKEN cDNA 4930542C21 gene [Source:NCBI gene (formerly Entrezgene);Acc:75175]

Location

Chromosome 16: 37,837,639-37,874,893 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000371933.1	4930542C21Rik-201	731	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000371936.1	4930542C21Rik-204	1207	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371934.1	4930542C21Rik-202	979	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371943.1	4930542C21Rik-211	924	No protein	-	lncRNA		-
ENSMUST00000371935.1	4930542C21Rik-203	873	No protein	-	lncRNA		-
ENSMUST00000371938.1	4930542C21Rik-206	866	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371937.1	4930542C21Rik-205	774	No protein	-	lncRNA		-
ENSMUST00000371939.1	4930542C21Rik-207	760	No protein	-	lncRNA		-
ENSMUST00000371942.1	4930542C21Rik-210	750	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371945.1	4930542C21Rik-213	654	No protein	-	lncRNA		-
ENSMUST00000371941.1	4930542C21Rik-209	585	No protein	-	lncRNA		-
ENSMUST00000371940.1	4930542C21Rik-208	582	No protein	-	lncRNA		-
ENSMUST00000371944.1	4930542C21Rik-212	521	No protein	-	lncRNA		-

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Summary

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