Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm40121 ENSMUSG00000123527

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Description

predicted gene, 40121 [Source:MGI Symbol;Acc:MGI:5623006]

Location

Chromosome 3: 107,603,741-107,763,874 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000258898.1	Gm40121-201	393	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000258900.1	Gm40121-203	1989	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258899.1	Gm40121-202	1149	No protein	-	lncRNA		-
ENSMUST00000258907.1	Gm40121-210	794	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258909.1	Gm40121-212	770	No protein	-	lncRNA		-
ENSMUST00000258910.1	Gm40121-213	737	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258912.1	Gm40121-215	669	No protein	-	lncRNA		-
ENSMUST00000258904.1	Gm40121-207	541	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258901.1	Gm40121-204	529	No protein	-	lncRNA		-
ENSMUST00000258903.1	Gm40121-206	527	No protein	-	lncRNA		-
ENSMUST00000258902.1	Gm40121-205	504	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258908.1	Gm40121-211	472	No protein	-	lncRNA		-
ENSMUST00000258914.1	Gm40121-217	420	No protein	-	lncRNA		-
ENSMUST00000258911.1	Gm40121-214	366	No protein	-	lncRNA		-
ENSMUST00000258913.1	Gm40121-216	358	No protein	-	lncRNA		-
ENSMUST00000258905.1	Gm40121-208	334	No protein	-	lncRNA		-
ENSMUST00000258906.1	Gm40121-209	190	No protein	-	lncRNA		-

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Summary

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