Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn1r36 ENSMUSG00000115482

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Description

vomeronasal 1 receptor 36 [Source:MGI Symbol;Acc:MGI:2159443]

Gene Synonyms

V1rc11

Location

Chromosome 6: 66,692,241-66,696,152 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 4 transcripts (splice variants), 185 orthologues and 237 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000226829.2	Vmn1r36-204	1923	305aa	ENSMUSP00000154183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20214	Q8R2E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226142.2	Vmn1r36-201	1770	268aa	ENSMUSP00000153912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BPT6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000226728.2	Vmn1r36-203	1458	199aa	ENSMUSP00000154433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BR36	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000226635.2	Vmn1r36-202	918	305aa	ENSMUSP00000153849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20214	Q8R2E3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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