Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- GO: Anatomical entity
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Molecular interactions
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ID History
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Gene: Gm47425 ENSMUSG00000112535

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Description

predicted gene, 47425 [Source:MGI Symbol;Acc:MGI:6096368]

Location

Chromosome 10: 118,553,478-118,621,872 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000311421.1	Gm47425-202	843	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000311433.1	Gm47425-214	1613	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311426.1	Gm47425-207	1550	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311425.1	Gm47425-206	1463	No protein	-	lncRNA		-
ENSMUST00000311430.1	Gm47425-211	1383	No protein	-	lncRNA		-
ENSMUST00000311429.1	Gm47425-210	1356	No protein	-	lncRNA		-
ENSMUST00000311427.1	Gm47425-208	1282	No protein	-	lncRNA		-
ENSMUST00000311436.1	Gm47425-217	1278	No protein	-	lncRNA		-
ENSMUST00000311435.1	Gm47425-216	1115	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000219645.2	Gm47425-201	1095	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000311428.1	Gm47425-209	976	No protein	-	lncRNA		-
ENSMUST00000311423.1	Gm47425-204	743	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311434.1	Gm47425-215	740	No protein	-	lncRNA		-
ENSMUST00000311422.1	Gm47425-203	669	No protein	-	lncRNA		-
ENSMUST00000311431.1	Gm47425-212	647	No protein	-	lncRNA		-
ENSMUST00000311437.1	Gm47425-218	598	No protein	-	lncRNA		-
ENSMUST00000311424.1	Gm47425-205	593	No protein	-	lncRNA		-
ENSMUST00000311432.1	Gm47425-213	572	No protein	-	lncRNA		-

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Summary

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