Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
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Gene: Gm47262 ENSMUSG00000110826

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Description

predicted gene, 47262 [Source:MGI Symbol;Acc:MGI:6096096]

Location

Chromosome 9: 62,105,905-62,152,278 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 11 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000217557.3	Gm47262-201	1532	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000274374.1	Gm47262-208	1504	No protein	-	lncRNA		-
ENSMUST00000274368.1	Gm47262-202	1462	No protein	-	lncRNA		-
ENSMUST00000274373.1	Gm47262-207	1451	No protein	-	lncRNA		-
ENSMUST00000274375.1	Gm47262-209	1445	No protein	-	lncRNA		-
ENSMUST00000274369.1	Gm47262-203	694	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274370.1	Gm47262-204	656	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274376.1	Gm47262-210	623	No protein	-	lncRNA		-
ENSMUST00000274371.1	Gm47262-205	424	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274372.1	Gm47262-206	381	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274377.1	Gm47262-211	325	No protein	-	lncRNA		-

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Summary

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