Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: Gm39214 ENSMUSG00000109754

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Description

predicted gene, 39214 [Source:MGI Symbol;Acc:MGI:5622099]

Gene Synonyms

Gm45423

Location

Chromosome 8: 86,427,602-86,491,873 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000336894.1	Gm39214-204	1664	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000210912.4	Gm39214-201	1718	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000247344.2	Gm39214-203	1535	No protein	-	lncRNA		-
ENSMUST00000336895.1	Gm39214-205	1516	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336903.1	Gm39214-213	1493	No protein	-	lncRNA		-
ENSMUST00000336901.1	Gm39214-211	1483	No protein	-	lncRNA		-
ENSMUST00000336902.1	Gm39214-212	1341	No protein	-	lncRNA		-
ENSMUST00000246541.2	Gm39214-202	1098	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336897.1	Gm39214-207	990	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336898.1	Gm39214-208	876	No protein	-	lncRNA		-
ENSMUST00000336896.1	Gm39214-206	729	No protein	-	lncRNA		-
ENSMUST00000336899.1	Gm39214-209	689	No protein	-	lncRNA		-
ENSMUST00000336900.1	Gm39214-210	395	No protein	-	lncRNA		-
ENSMUST00000336904.1	Gm39214-214	246	No protein	-	lncRNA		-

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Summary

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