Summary
- Splice variants
- Transcript comparison
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Gene: Gm43700 ENSMUSG00000107193

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Description

predicted gene 43700 [Source:MGI Symbol;Acc:MGI:5663837]

Location

Chromosome 5: 43,183,885-43,195,679 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 17 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000200967.3	Gm43700-201	420	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000269427.1	Gm43700-214	736	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269424.1	Gm43700-211	711	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269421.1	Gm43700-208	628	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269422.1	Gm43700-209	591	No protein	-	lncRNA		-
ENSMUST00000269429.1	Gm43700-216	582	No protein	-	lncRNA		-
ENSMUST00000269419.1	Gm43700-206	581	No protein	-	lncRNA		-
ENSMUST00000269417.1	Gm43700-204	577	No protein	-	lncRNA		-
ENSMUST00000269415.1	Gm43700-202	559	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269423.1	Gm43700-210	492	No protein	-	lncRNA		-
ENSMUST00000269426.1	Gm43700-213	461	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269428.1	Gm43700-215	444	No protein	-	lncRNA		-
ENSMUST00000269420.1	Gm43700-207	417	No protein	-	lncRNA		-
ENSMUST00000269416.1	Gm43700-203	409	No protein	-	lncRNA		-
ENSMUST00000269430.1	Gm43700-217	391	No protein	-	lncRNA		-
ENSMUST00000269418.1	Gm43700-205	374	No protein	-	lncRNA		-
ENSMUST00000269425.1	Gm43700-212	350	No protein	-	lncRNA		-

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Summary

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