Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Mannr ENSMUSG00000102590

.

Description

Mecom adjacent non-protein coding RNA [Source:MGI Symbol;Acc:MGI:5564803]

Gene Synonyms

Manr

Location

Chromosome 3: 29,945,110-29,978,491 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 16 transcripts (splice variants), 1 orthologue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000193549.4	Mannr-201	1616	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000329523.1	Mannr-208	1845	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245379.2	Mannr-204	1786	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240918.1	Mannr-202	1624	No protein	-	lncRNA		-
ENSMUST00000329522.1	Mannr-207	1624	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000329525.1	Mannr-210	1564	No protein	-	lncRNA		-
ENSMUST00000329531.1	Mannr-216	1390	No protein	-	lncRNA		-
ENSMUST00000329528.1	Mannr-213	1358	No protein	-	lncRNA		-
ENSMUST00000329526.1	Mannr-211	1003	No protein	-	lncRNA		-
ENSMUST00000329527.1	Mannr-212	971	No protein	-	lncRNA		-
ENSMUST00000240968.2	Mannr-203	818	No protein	-	lncRNA		-
ENSMUST00000329529.1	Mannr-214	802	No protein	-	lncRNA		-
ENSMUST00000329520.1	Mannr-205	724	No protein	-	lncRNA		-
ENSMUST00000329524.1	Mannr-209	509	No protein	-	lncRNA		-
ENSMUST00000329521.1	Mannr-206	457	No protein	-	lncRNA		-
ENSMUST00000329530.1	Mannr-215	370	No protein	-	lncRNA		-

.

Summary

.

.