Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
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Phenotypes
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ID History
- Gene history

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Gene: 1700123O21Rik ENSMUSG00000101481

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Description

RIKEN cDNA 1700123O21 gene [Source:MGI Symbol;Acc:MGI:1915488]

Location

Chromosome 16: 5,768,398-5,841,543 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000377985.1	1700123O21Rik-202	692	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000378001.1	1700123O21Rik-210	1003	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377987.1	1700123O21Rik-204	683	No protein	-	lncRNA		-
ENSMUST00000377999.1	1700123O21Rik-209	678	No protein	-	lncRNA		-
ENSMUST00000190515.2	1700123O21Rik-201	677	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000377998.1	1700123O21Rik-208	602	No protein	-	lncRNA		-
ENSMUST00000377986.1	1700123O21Rik-203	589	No protein	-	lncRNA		-
ENSMUST00000377988.1	1700123O21Rik-205	570	No protein	-	lncRNA		-
ENSMUST00000377993.1	1700123O21Rik-207	542	No protein	-	lncRNA		-
ENSMUST00000378002.1	1700123O21Rik-211	503	No protein	-	lncRNA		-
ENSMUST00000377989.1	1700123O21Rik-206	465	No protein	-	lncRNA		-

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Summary

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