Gene: 6530403H02Rik ENSMUSG00000098097

Description

RIKEN cDNA 6530403H02 gene [Source:MGI Symbol;Acc:MGI:2444638]

Location

Chromosome 3: 120,363,580-120,680,733 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 51 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000343774.1	6530403H02Rik-207	1168	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000182124.8	6530403H02Rik-202	3191	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000244864.1	6530403H02Rik-206	2121	No protein	-	lncRNA	-
ENSMUST00000343776.1	6530403H02Rik-209	1854	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000182099.3	6530403H02Rik-201	1674	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000343818.1	6530403H02Rik-251	1577	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244165.1	6530403H02Rik-205	1540	No protein	-	lncRNA	-
ENSMUST00000343811.1	6530403H02Rik-244	1484	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343808.1	6530403H02Rik-241	1417	No protein	-	lncRNA	-
ENSMUST00000343775.1	6530403H02Rik-208	1376	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343810.1	6530403H02Rik-243	1336	No protein	-	lncRNA	-
ENSMUST00000343781.1	6530403H02Rik-214	1333	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343777.1	6530403H02Rik-210	1309	No protein	-	lncRNA	-
ENSMUST00000343803.1	6530403H02Rik-236	1247	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343802.1	6530403H02Rik-235	1185	No protein	-	lncRNA	-
ENSMUST00000343799.1	6530403H02Rik-232	1183	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343816.1	6530403H02Rik-249	1078	No protein	-	lncRNA	-
ENSMUST00000343792.1	6530403H02Rik-225	1048	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343786.1	6530403H02Rik-219	1004	No protein	-	lncRNA	-
ENSMUST00000343785.1	6530403H02Rik-218	971	No protein	-	lncRNA	-
ENSMUST00000343779.1	6530403H02Rik-212	964	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343801.1	6530403H02Rik-234	960	No protein	-	lncRNA	-
ENSMUST00000343780.1	6530403H02Rik-213	949	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343778.1	6530403H02Rik-211	937	No protein	-	lncRNA	-
ENSMUST00000343789.1	6530403H02Rik-222	883	No protein	-	lncRNA	-
ENSMUST00000343793.1	6530403H02Rik-226	858	No protein	-	lncRNA	-
ENSMUST00000183168.8	6530403H02Rik-203	843	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000343795.1	6530403H02Rik-228	843	No protein	-	lncRNA	-
ENSMUST00000343791.1	6530403H02Rik-224	834	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343797.1	6530403H02Rik-230	817	No protein	-	lncRNA	-
ENSMUST00000343800.1	6530403H02Rik-233	813	No protein	-	lncRNA	-
ENSMUST00000343806.1	6530403H02Rik-239	808	No protein	-	lncRNA	-
ENSMUST00000343807.1	6530403H02Rik-240	805	No protein	-	lncRNA	-
ENSMUST00000343805.1	6530403H02Rik-238	802	No protein	-	lncRNA	-
ENSMUST00000343788.1	6530403H02Rik-221	789	No protein	-	lncRNA	-
ENSMUST00000343790.1	6530403H02Rik-223	772	No protein	-	lncRNA	-
ENSMUST00000343782.1	6530403H02Rik-215	763	No protein	-	lncRNA	-
ENSMUST00000343783.1	6530403H02Rik-216	717	No protein	-	lncRNA	-
ENSMUST00000343812.1	6530403H02Rik-245	711	No protein	-	lncRNA	-
ENSMUST00000343817.1	6530403H02Rik-250	682	No protein	-	lncRNA	-
ENSMUST00000343798.1	6530403H02Rik-231	680	No protein	-	lncRNA	-
ENSMUST00000343787.1	6530403H02Rik-220	672	No protein	-	lncRNA	-
ENSMUST00000343794.1	6530403H02Rik-227	672	No protein	-	lncRNA	-
ENSMUST00000343813.1	6530403H02Rik-246	672	No protein	-	lncRNA	-
ENSMUST00000183276.8	6530403H02Rik-204	659	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000343804.1	6530403H02Rik-237	651	No protein	-	lncRNA	-
ENSMUST00000343784.1	6530403H02Rik-217	578	No protein	-	lncRNA	-
ENSMUST00000343796.1	6530403H02Rik-229	549	No protein	-	lncRNA	-
ENSMUST00000343815.1	6530403H02Rik-248	519	No protein	-	lncRNA	-
ENSMUST00000343814.1	6530403H02Rik-247	506	No protein	-	lncRNA	-
ENSMUST00000343809.1	6530403H02Rik-242	488	No protein	-	lncRNA	-

Gene: 6530403H02Rik ENSMUSG00000098097

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Gene: 6530403H02Rik ENSMUSG00000098097

Summary

About Us

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