Summary
- Splice variants
- Transcript comparison
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Gene: Gm4890 ENSMUSG00000097174

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Description

predicted gene 4890 [Source:MGI Symbol;Acc:MGI:3779445]

Location

Chromosome 8: 80,021,270-80,059,061 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000245723.2	Gm4890-205	721	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181030.5	Gm4890-201	3939	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000359346.1	Gm4890-212	1335	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245746.2	Gm4890-206	1306	No protein	-	lncRNA		-
ENSMUST00000359351.1	Gm4890-217	1089	No protein	-	lncRNA		-
ENSMUST00000246396.1	Gm4890-208	939	No protein	-	lncRNA		-
ENSMUST00000209627.4	Gm4890-202	889	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000246233.2	Gm4890-207	867	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243346.2	Gm4890-204	836	No protein	-	lncRNA		-
ENSMUST00000241371.2	Gm4890-203	815	No protein	-	lncRNA		-
ENSMUST00000359348.1	Gm4890-214	809	No protein	-	lncRNA		-
ENSMUST00000359345.1	Gm4890-211	735	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000359344.1	Gm4890-210	671	No protein	-	lncRNA		-
ENSMUST00000359343.1	Gm4890-209	659	No protein	-	lncRNA		-
ENSMUST00000359349.1	Gm4890-215	527	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000359347.1	Gm4890-213	413	No protein	-	lncRNA		-
ENSMUST00000359350.1	Gm4890-216	308	No protein	-	lncRNA		-

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Summary

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