Gene: 1600020E01Rik ENSMUSG00000097048

Description

RIKEN cDNA 1600020E01 gene [Source:MGI Symbol;Acc:MGI:1919262]

Location

Chromosome 6: 86,501,774-86,559,453 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 70 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000204738.3	1600020E01Rik-207	1997	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000319584.1	1600020E01Rik-214	2292	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000180896.9	1600020E01Rik-201	2101	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000204663.2	1600020E01Rik-206	2007	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000319585.1	1600020E01Rik-215	1992	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319609.1	1600020E01Rik-239	1400	No protein	-	lncRNA	-
ENSMUST00000245899.2	1600020E01Rik-213	1394	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319606.1	1600020E01Rik-236	1391	No protein	-	lncRNA	-
ENSMUST00000204047.5	1600020E01Rik-204	1275	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000181928.6	1600020E01Rik-202	1230	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000319591.1	1600020E01Rik-221	1198	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319590.1	1600020E01Rik-220	1187	No protein	-	lncRNA	-
ENSMUST00000319610.1	1600020E01Rik-240	1016	No protein	-	lncRNA	-
ENSMUST00000241973.2	1600020E01Rik-211	949	No protein	-	lncRNA	-
ENSMUST00000319600.1	1600020E01Rik-230	922	No protein	-	lncRNA	-
ENSMUST00000319587.1	1600020E01Rik-217	878	No protein	-	lncRNA	-
ENSMUST00000319605.1	1600020E01Rik-235	870	No protein	-	lncRNA	-
ENSMUST00000319607.1	1600020E01Rik-237	829	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319599.1	1600020E01Rik-229	828	No protein	-	lncRNA	-
ENSMUST00000319616.1	1600020E01Rik-246	827	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241187.2	1600020E01Rik-210	821	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319630.1	1600020E01Rik-260	775	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319621.1	1600020E01Rik-251	768	No protein	-	lncRNA	-
ENSMUST00000319614.1	1600020E01Rik-244	763	No protein	-	lncRNA	-
ENSMUST00000319589.1	1600020E01Rik-219	758	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319586.1	1600020E01Rik-216	754	No protein	-	lncRNA	-
ENSMUST00000319608.1	1600020E01Rik-238	731	No protein	-	lncRNA	-
ENSMUST00000319611.1	1600020E01Rik-241	717	No protein	-	lncRNA	-
ENSMUST00000204008.3	1600020E01Rik-203	713	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000319626.1	1600020E01Rik-256	709	No protein	-	lncRNA	-
ENSMUST00000240938.2	1600020E01Rik-209	698	No protein	-	lncRNA	-
ENSMUST00000319604.1	1600020E01Rik-234	693	No protein	-	lncRNA	-
ENSMUST00000319618.1	1600020E01Rik-248	688	No protein	-	lncRNA	-
ENSMUST00000319617.1	1600020E01Rik-247	681	No protein	-	lncRNA	-
ENSMUST00000319615.1	1600020E01Rik-245	671	No protein	-	lncRNA	-
ENSMUST00000319602.1	1600020E01Rik-232	641	No protein	-	lncRNA	-
ENSMUST00000319635.1	1600020E01Rik-265	638	No protein	-	lncRNA	-
ENSMUST00000319597.1	1600020E01Rik-227	630	No protein	-	lncRNA	-
ENSMUST00000319613.1	1600020E01Rik-243	629	No protein	-	lncRNA	-
ENSMUST00000319603.1	1600020E01Rik-233	622	No protein	-	lncRNA	-
ENSMUST00000319627.1	1600020E01Rik-257	621	No protein	-	lncRNA	-
ENSMUST00000319598.1	1600020E01Rik-228	620	No protein	-	lncRNA	-
ENSMUST00000319629.1	1600020E01Rik-259	612	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319612.1	1600020E01Rik-242	607	No protein	-	lncRNA	-
ENSMUST00000319595.1	1600020E01Rik-225	599	No protein	-	lncRNA	-
ENSMUST00000319588.1	1600020E01Rik-218	578	No protein	-	lncRNA	-
ENSMUST00000319601.1	1600020E01Rik-231	566	No protein	-	lncRNA	-
ENSMUST00000319636.1	1600020E01Rik-266	564	No protein	-	lncRNA	-
ENSMUST00000319596.1	1600020E01Rik-226	543	No protein	-	lncRNA	-
ENSMUST00000319633.1	1600020E01Rik-263	541	No protein	-	lncRNA	-
ENSMUST00000319594.1	1600020E01Rik-224	533	No protein	-	lncRNA	-
ENSMUST00000319620.1	1600020E01Rik-250	532	No protein	-	lncRNA	-
ENSMUST00000319593.1	1600020E01Rik-223	523	No protein	-	lncRNA	-
ENSMUST00000319619.1	1600020E01Rik-249	520	No protein	-	lncRNA	-
ENSMUST00000319637.1	1600020E01Rik-267	504	No protein	-	lncRNA	-
ENSMUST00000319632.1	1600020E01Rik-262	498	No protein	-	lncRNA	-
ENSMUST00000319639.1	1600020E01Rik-269	492	No protein	-	lncRNA	-
ENSMUST00000319628.1	1600020E01Rik-258	482	No protein	-	lncRNA	-
ENSMUST00000245664.2	1600020E01Rik-212	471	No protein	-	lncRNA	-
ENSMUST00000319623.1	1600020E01Rik-253	471	No protein	-	lncRNA	-
ENSMUST00000319631.1	1600020E01Rik-261	469	No protein	-	lncRNA	-
ENSMUST00000319634.1	1600020E01Rik-264	459	No protein	-	lncRNA	-
ENSMUST00000319592.1	1600020E01Rik-222	428	No protein	-	lncRNA	-
ENSMUST00000319624.1	1600020E01Rik-254	372	No protein	-	lncRNA	-
ENSMUST00000319640.1	1600020E01Rik-270	368	No protein	-	lncRNA	-
ENSMUST00000204068.3	1600020E01Rik-205	361	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000319625.1	1600020E01Rik-255	330	No protein	-	lncRNA	-
ENSMUST00000205028.2	1600020E01Rik-208	329	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000319638.1	1600020E01Rik-268	294	No protein	-	lncRNA	-
ENSMUST00000319622.1	1600020E01Rik-252	256	No protein	-	lncRNA	-

Gene: 1600020E01Rik ENSMUSG00000097048

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Gene: 1600020E01Rik ENSMUSG00000097048

Summary

About Us

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