Summary
- Splice variants
- Transcript comparison
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Gene: B130034C11Rik ENSMUSG00000093606

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Description

RIKEN cDNA B130034C11 gene [Source:MGI Symbol;Acc:MGI:3041186]

Location

Chromosome 16: 87,292,095-87,309,977 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000176296.4	B130034C11Rik-202	2195	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245088.2	B130034C11Rik-209	1510	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240796.2	B130034C11Rik-203	2536	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241649.2	B130034C11Rik-204	2472	No protein	-	lncRNA		-
ENSMUST00000242389.1	B130034C11Rik-207	1858	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000175717.4	B130034C11Rik-201	1552	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000268445.1	B130034C11Rik-210	1490	No protein	-	lncRNA		-
ENSMUST00000241858.1	B130034C11Rik-205	1424	No protein	-	lncRNA		-
ENSMUST00000242906.1	B130034C11Rik-208	1347	No protein	-	lncRNA		-
ENSMUST00000268447.1	B130034C11Rik-212	1046	No protein	-	lncRNA		-
ENSMUST00000242126.2	B130034C11Rik-206	721	No protein	-	lncRNA		-
ENSMUST00000268451.1	B130034C11Rik-216	602	No protein	-	lncRNA		-
ENSMUST00000268446.1	B130034C11Rik-211	597	No protein	-	lncRNA		-
ENSMUST00000268448.1	B130034C11Rik-213	545	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000268450.1	B130034C11Rik-215	510	No protein	-	lncRNA		-
ENSMUST00000268449.1	B130034C11Rik-214	500	No protein	-	lncRNA		-
ENSMUST00000268453.1	B130034C11Rik-218	496	No protein	-	lncRNA		-
ENSMUST00000268452.1	B130034C11Rik-217	440	No protein	-	lncRNA		-

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Summary

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