Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Phenotypes
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Gene: 1700116B05Rik ENSMUSG00000092276

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Description

RIKEN cDNA 1700116B05 gene [Source:MGI Symbol;Acc:MGI:1925889]

Location

Chromosome 16: 50,599,993-50,604,473 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000299677.1	1700116B05Rik-203	630	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000174511.3	1700116B05Rik-202	605	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000299678.1	1700116B05Rik-204	485	No protein	-	lncRNA		-
ENSMUST00000299680.1	1700116B05Rik-206	473	No protein	-	lncRNA		-
ENSMUST00000173461.4	1700116B05Rik-201	465	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000299679.1	1700116B05Rik-205	461	No protein	-	lncRNA		-
ENSMUST00000299681.1	1700116B05Rik-207	414	No protein	-	lncRNA		-

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Summary

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