Gene: 1700099I09Rik ENSMUSG00000091906

Description

RIKEN cDNA 1700099I09 gene [Source:MGI Symbol;Acc:MGI:1923874]

Location

Chromosome 13: 102,896,720-102,915,254 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 34 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000362419.1	1700099I09Rik-204	499	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362423.1	1700099I09Rik-208	1013	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000167834.3	1700099I09Rik-201	821	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000362431.1	1700099I09Rik-216	745	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000171722.3	1700099I09Rik-203	724	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000362425.1	1700099I09Rik-210	700	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362434.1	1700099I09Rik-219	688	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362422.1	1700099I09Rik-207	683	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362432.1	1700099I09Rik-217	631	No protein	-	lncRNA	-
ENSMUST00000362428.1	1700099I09Rik-213	629	No protein	-	lncRNA	-
ENSMUST00000362440.1	1700099I09Rik-225	608	No protein	-	lncRNA	-
ENSMUST00000362430.1	1700099I09Rik-215	596	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362433.1	1700099I09Rik-218	589	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362435.1	1700099I09Rik-220	581	No protein	-	lncRNA	-
ENSMUST00000362439.1	1700099I09Rik-224	579	No protein	-	lncRNA	-
ENSMUST00000362646.1	1700099I09Rik-233	557	No protein	-	lncRNA	-
ENSMUST00000362421.1	1700099I09Rik-206	555	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362427.1	1700099I09Rik-212	549	No protein	-	lncRNA	-
ENSMUST00000362429.1	1700099I09Rik-214	544	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362420.1	1700099I09Rik-205	537	No protein	-	lncRNA	-
ENSMUST00000362424.1	1700099I09Rik-209	494	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362645.1	1700099I09Rik-232	486	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362437.1	1700099I09Rik-222	452	No protein	-	lncRNA	-
ENSMUST00000362438.1	1700099I09Rik-223	428	No protein	-	lncRNA	-
ENSMUST00000362642.1	1700099I09Rik-229	426	No protein	-	lncRNA	-
ENSMUST00000362441.1	1700099I09Rik-226	413	No protein	-	lncRNA	-
ENSMUST00000362647.1	1700099I09Rik-234	383	No protein	-	lncRNA	-
ENSMUST00000362436.1	1700099I09Rik-221	378	No protein	-	lncRNA	-
ENSMUST00000362640.1	1700099I09Rik-227	377	No protein	-	lncRNA	-
ENSMUST00000362644.1	1700099I09Rik-231	351	No protein	-	lncRNA	-
ENSMUST00000362641.1	1700099I09Rik-228	350	No protein	-	lncRNA	-
ENSMUST00000362426.1	1700099I09Rik-211	334	No protein	-	lncRNA	-
ENSMUST00000170645.3	1700099I09Rik-202	315	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000362643.1	1700099I09Rik-230	315	No protein	-	lncRNA	-

Gene: 1700099I09Rik ENSMUSG00000091906

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Gene: 1700099I09Rik ENSMUSG00000091906

Summary

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