Gene: 1700029M20Rik ENSMUSG00000086788

Description

RIKEN cDNA 1700029M20 gene [Source:MGI Symbol;Acc:MGI:1913597]

Location

Chromosome 4: 135,345,685-135,357,517 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 21 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000328475.1	1700029M20Rik-205	1568	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000153347.2	1700029M20Rik-203	2963	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000134416.3	1700029M20Rik-201	2870	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000148529.3	1700029M20Rik-202	2345	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000328476.1	1700029M20Rik-206	2302	No protein	-	lncRNA	-
ENSMUST00000328486.1	1700029M20Rik-216	1946	No protein	-	lncRNA	-
ENSMUST00000328483.1	1700029M20Rik-213	1819	No protein	-	lncRNA	-
ENSMUST00000328484.1	1700029M20Rik-214	1799	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000328480.1	1700029M20Rik-210	1756	No protein	-	lncRNA	-
ENSMUST00000328487.1	1700029M20Rik-217	1655	No protein	-	lncRNA	-
ENSMUST00000328478.1	1700029M20Rik-208	1362	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000328482.1	1700029M20Rik-212	1206	No protein	-	lncRNA	-
ENSMUST00000328488.1	1700029M20Rik-218	1163	No protein	-	lncRNA	-
ENSMUST00000328477.1	1700029M20Rik-207	1078	No protein	-	lncRNA	-
ENSMUST00000328479.1	1700029M20Rik-209	986	No protein	-	lncRNA	-
ENSMUST00000328485.1	1700029M20Rik-215	972	No protein	-	lncRNA	-
ENSMUST00000166316.2	1700029M20Rik-204	957	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000328481.1	1700029M20Rik-211	931	No protein	-	lncRNA	-
ENSMUST00000328489.1	1700029M20Rik-219	844	No protein	-	lncRNA	-
ENSMUST00000328491.1	1700029M20Rik-221	563	No protein	-	lncRNA	-
ENSMUST00000328490.1	1700029M20Rik-220	531	No protein	-	lncRNA	-

Gene: 1700029M20Rik ENSMUSG00000086788

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Gene: 1700029M20Rik ENSMUSG00000086788

Summary

About Us

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Our sister sites

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