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Gene: 1700030C12Rik ENSMUSG00000086459

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Description

RIKEN cDNA 1700030C12 gene [Source:MGI Symbol;Acc:MGI:1919496]

Gene Synonyms

ENSMUSG00000073112

Location

Chromosome 11: 23,446,606-23,449,843 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000261618.1	1700030C12Rik-204	635	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000125126.3	1700030C12Rik-201	1576	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000133489.3	1700030C12Rik-202	1197	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000261626.1	1700030C12Rik-212	873	No protein	-	lncRNA		-
ENSMUST00000261623.1	1700030C12Rik-209	872	No protein	-	lncRNA		-
ENSMUST00000261622.1	1700030C12Rik-208	788	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261621.1	1700030C12Rik-207	698	No protein	-	lncRNA		-
ENSMUST00000261619.1	1700030C12Rik-205	687	No protein	-	lncRNA		-
ENSMUST00000261620.1	1700030C12Rik-206	632	No protein	-	lncRNA		-
ENSMUST00000144783.2	1700030C12Rik-203	555	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000261624.1	1700030C12Rik-210	490	No protein	-	lncRNA		-
ENSMUST00000261625.1	1700030C12Rik-211	421	No protein	-	lncRNA		-

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Summary

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