Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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- Gene gain/loss tree
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Phenotypes
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Gene: F730016J06Rik ENSMUSG00000086425

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Description

RIKEN cDNA F730016J06 gene [Source:MGI Symbol;Acc:MGI:2443559]

Location

Chromosome 2: 27,985,443-28,017,753 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000287144.1	F730016J06Rik-206	1436	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000128888.2	F730016J06Rik-202	3699	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000156508.2	F730016J06Rik-203	2593	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000287145.1	F730016J06Rik-207	1567	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287148.1	F730016J06Rik-210	1490	No protein	-	lncRNA		-
ENSMUST00000287146.1	F730016J06Rik-208	1358	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000126140.8	F730016J06Rik-201	1344	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000287151.1	F730016J06Rik-212	1052	No protein	-	lncRNA		-
ENSMUST00000287147.1	F730016J06Rik-209	1036	No protein	-	lncRNA		-
ENSMUST00000245966.2	F730016J06Rik-205	916	No protein	-	lncRNA		-
ENSMUST00000287152.1	F730016J06Rik-213	730	No protein	-	lncRNA		-
ENSMUST00000287150.1	F730016J06Rik-211	568	No protein	-	lncRNA		-
ENSMUST00000245895.1	F730016J06Rik-204	444	No protein	-	lncRNA		-

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Summary

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