Gene: Snhg12 ENSMUSG00000086290

Description

small nucleolar RNA host gene 12 [Source:MGI Symbol;Acc:MGI:1916721]

Gene Synonyms

2310005L22Rik

Location

Chromosome 4: 132,035,905-132,038,762 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 48 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000242543.2	Snhg12-214	2842	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000243691.2	Snhg12-219	2109	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242168.2	Snhg12-212	2035	No protein	-	lncRNA	-
ENSMUST00000303225.1	Snhg12-232	1896	No protein	-	lncRNA	-
ENSMUST00000128131.4	Snhg12-203	1849	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000231453.4	Snhg12-208	1782	No protein	-	lncRNA	-
ENSMUST00000232301.4	Snhg12-210	1544	No protein	-	lncRNA	-
ENSMUST00000137343.11	Snhg12-204	1495	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000303215.1	Snhg12-222	1325	No protein	-	lncRNA	-
ENSMUST00000126380.6	Snhg12-201	1261	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000240774.2	Snhg12-211	1230	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303223.1	Snhg12-230	1207	No protein	-	lncRNA	-
ENSMUST00000243394.2	Snhg12-217	1142	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303241.1	Snhg12-246	1123	No protein	-	lncRNA	-
ENSMUST00000144705.11	Snhg12-205	1005	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232260.4	Snhg12-209	981	No protein	-	lncRNA	-
ENSMUST00000303231.1	Snhg12-237	969	No protein	-	lncRNA	-
ENSMUST00000303240.1	Snhg12-245	891	No protein	-	lncRNA	-
ENSMUST00000182826.4	Snhg12-207	882	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000243267.2	Snhg12-216	865	No protein	-	lncRNA	-
ENSMUST00000303234.1	Snhg12-240	852	No protein	-	lncRNA	-
ENSMUST00000303228.1	Snhg12-234	838	No protein	-	lncRNA	-
ENSMUST00000303224.1	Snhg12-231	832	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303235.1	Snhg12-241	830	No protein	-	lncRNA	-
ENSMUST00000303233.1	Snhg12-239	761	No protein	-	lncRNA	-
ENSMUST00000303239.1	Snhg12-244	742	No protein	-	lncRNA	-
ENSMUST00000303242.1	Snhg12-247	740	No protein	-	lncRNA	-
ENSMUST00000242253.2	Snhg12-213	736	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000153474.11	Snhg12-206	724	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000303229.1	Snhg12-235	711	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000128000.11	Snhg12-202	679	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000303221.1	Snhg12-228	645	No protein	-	lncRNA	-
ENSMUST00000303217.1	Snhg12-224	629	No protein	-	lncRNA	-
ENSMUST00000303222.1	Snhg12-229	605	No protein	-	lncRNA	-
ENSMUST00000303216.1	Snhg12-223	597	No protein	-	lncRNA	-
ENSMUST00000303227.1	Snhg12-233	596	No protein	-	lncRNA	-
ENSMUST00000243098.2	Snhg12-215	562	No protein	-	lncRNA	-
ENSMUST00000243588.1	Snhg12-218	549	No protein	-	lncRNA	-
ENSMUST00000303214.1	Snhg12-221	545	No protein	-	lncRNA	-
ENSMUST00000303232.1	Snhg12-238	500	No protein	-	lncRNA	-
ENSMUST00000303220.1	Snhg12-227	499	No protein	-	lncRNA	-
ENSMUST00000303219.1	Snhg12-226	491	No protein	-	lncRNA	-
ENSMUST00000303230.1	Snhg12-236	487	No protein	-	lncRNA	-
ENSMUST00000303213.1	Snhg12-220	480	No protein	-	lncRNA	-
ENSMUST00000303218.1	Snhg12-225	479	No protein	-	lncRNA	-
ENSMUST00000303238.1	Snhg12-243	462	No protein	-	lncRNA	-
ENSMUST00000303236.1	Snhg12-242	403	No protein	-	lncRNA	-
ENSMUST00000303243.1	Snhg12-248	346	No protein	-	lncRNA	-

Gene: Snhg12 ENSMUSG00000086290

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Gene: Snhg12 ENSMUSG00000086290

Summary

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