Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: 4930423M02Rik ENSMUSG00000086066

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Description

RIKEN cDNA 4930423M02 gene [Source:MGI Symbol;Acc:MGI:1921122]

Location

Chromosome 4: 5,632,311-5,642,729 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000130895.3	4930423M02Rik-201	1635	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000258564.1	4930423M02Rik-218	1998	No protein	-	lncRNA		-
ENSMUST00000258552.1	4930423M02Rik-206	1905	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258550.1	4930423M02Rik-204	1859	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258551.1	4930423M02Rik-205	1804	No protein	-	lncRNA		-
ENSMUST00000258549.1	4930423M02Rik-203	1716	No protein	-	lncRNA		-
ENSMUST00000258553.1	4930423M02Rik-207	1369	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258554.1	4930423M02Rik-208	1351	No protein	-	lncRNA		-
ENSMUST00000258556.1	4930423M02Rik-210	1307	No protein	-	lncRNA		-
ENSMUST00000258555.1	4930423M02Rik-209	1257	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258557.1	4930423M02Rik-211	1246	No protein	-	lncRNA		-
ENSMUST00000156903.8	4930423M02Rik-202	1205	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000258558.1	4930423M02Rik-212	1047	No protein	-	lncRNA		-
ENSMUST00000258562.1	4930423M02Rik-216	568	No protein	-	lncRNA		-
ENSMUST00000258561.1	4930423M02Rik-215	508	No protein	-	lncRNA		-
ENSMUST00000258560.1	4930423M02Rik-214	504	No protein	-	lncRNA		-
ENSMUST00000258559.1	4930423M02Rik-213	420	No protein	-	lncRNA		-
ENSMUST00000258563.1	4930423M02Rik-217	393	No protein	-	lncRNA		-

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Summary

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