Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Gm12973 ENSMUSG00000085804

.

Description

predicted gene 12973 [Source:MGI Symbol;Acc:MGI:3650042]

Location

Chromosome 4: 130,685,192-130,771,702 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000314041.1	Gm12973-202	616	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000143967.3	Gm12973-201	1049	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000314051.1	Gm12973-212	1023	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314056.1	Gm12973-217	951	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314058.1	Gm12973-219	867	No protein	-	lncRNA		-
ENSMUST00000314057.1	Gm12973-218	865	No protein	-	lncRNA		-
ENSMUST00000314046.1	Gm12973-207	855	No protein	-	lncRNA		-
ENSMUST00000314042.1	Gm12973-203	751	No protein	-	lncRNA		-
ENSMUST00000314052.1	Gm12973-213	744	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314050.1	Gm12973-211	727	No protein	-	lncRNA		-
ENSMUST00000314047.1	Gm12973-208	708	No protein	-	lncRNA		-
ENSMUST00000314049.1	Gm12973-210	646	No protein	-	lncRNA		-
ENSMUST00000314053.1	Gm12973-214	554	No protein	-	lncRNA		-
ENSMUST00000314043.1	Gm12973-204	524	No protein	-	lncRNA		-
ENSMUST00000314048.1	Gm12973-209	491	No protein	-	lncRNA		-
ENSMUST00000314054.1	Gm12973-215	478	No protein	-	lncRNA		-
ENSMUST00000314055.1	Gm12973-216	446	No protein	-	lncRNA		-
ENSMUST00000314045.1	Gm12973-206	418	No protein	-	lncRNA		-
ENSMUST00000314044.1	Gm12973-205	383	No protein	-	lncRNA		-

.

Summary

.

.