Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: Gm15886 ENSMUSG00000085754

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Description

predicted gene 15886 [Source:MGI Symbol;Acc:MGI:3801744]

Location

Chromosome 3: 103,679,229-103,696,723 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000361345.1	Gm15886-205	986	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000123155.8	Gm15886-201	1250	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000361347.1	Gm15886-207	1065	No protein	-	lncRNA		-
ENSMUST00000361351.1	Gm15886-211	1040	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361352.1	Gm15886-212	895	No protein	-	lncRNA		-
ENSMUST00000361349.1	Gm15886-209	885	No protein	-	lncRNA		-
ENSMUST00000361350.1	Gm15886-210	800	No protein	-	lncRNA		-
ENSMUST00000138430.2	Gm15886-202	785	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361355.1	Gm15886-215	601	No protein	-	lncRNA		-
ENSMUST00000152867.2	Gm15886-203	569	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361346.1	Gm15886-206	565	No protein	-	lncRNA		-
ENSMUST00000154868.3	Gm15886-204	506	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361356.1	Gm15886-216	498	No protein	-	lncRNA		-
ENSMUST00000361348.1	Gm15886-208	473	No protein	-	lncRNA		-
ENSMUST00000361353.1	Gm15886-213	419	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361354.1	Gm15886-214	393	No protein	-	lncRNA		-

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Summary

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