Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- GO: Anatomical entity
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Gene: Gm13201 ENSMUSG00000078494

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Description

predicted gene 13201 [Source:MGI Symbol;Acc:MGI:3649941]

Location

Chromosome 4: 148,126,406-148,159,946 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000295694.1	Gm13201-203	1045	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000144031.4	Gm13201-201	3292	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000295702.1	Gm13201-211	2286	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295698.1	Gm13201-207	2226	No protein	-	lncRNA		-
ENSMUST00000295703.1	Gm13201-212	2209	No protein	-	lncRNA		-
ENSMUST00000295699.1	Gm13201-208	2126	No protein	-	lncRNA		-
ENSMUST00000295701.1	Gm13201-210	1995	No protein	-	lncRNA		-
ENSMUST00000295700.1	Gm13201-209	1910	No protein	-	lncRNA		-
ENSMUST00000295696.1	Gm13201-205	1894	No protein	-	lncRNA		-
ENSMUST00000295697.1	Gm13201-206	1785	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000177629.3	Gm13201-202	1603	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000295704.1	Gm13201-213	1305	No protein	-	lncRNA		-
ENSMUST00000295708.1	Gm13201-217	1169	No protein	-	lncRNA		-
ENSMUST00000295706.1	Gm13201-215	984	No protein	-	lncRNA		-
ENSMUST00000295707.1	Gm13201-216	875	No protein	-	lncRNA		-
ENSMUST00000295695.1	Gm13201-204	531	No protein	-	lncRNA		-
ENSMUST00000295705.1	Gm13201-214	501	No protein	-	lncRNA		-
ENSMUST00000295709.1	Gm13201-218	453	No protein	-	lncRNA		-

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Summary

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