Gene: 5031425E22Rik ENSMUSG00000073147

Description

RIKEN cDNA 5031425E22 gene [Source:MGI Symbol;Acc:MGI:1923227]

Gene Synonyms

BC050254

Location

Chromosome 5: 23,557,556-23,639,396 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 83 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000336796.1	5031425E22Rik-225	538	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000101522.5	5031425E22Rik-201	3015	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000189045.2	5031425E22Rik-204	1983	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000241399.1	5031425E22Rik-207	1981	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243304.2	5031425E22Rik-215	1974	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241652.2	5031425E22Rik-208	1957	No protein	-	lncRNA	-
ENSMUST00000336846.1	5031425E22Rik-275	1943	No protein	-	lncRNA	-
ENSMUST00000242754.2	5031425E22Rik-212	1896	No protein	-	lncRNA	-
ENSMUST00000245193.2	5031425E22Rik-221	1867	No protein	-	lncRNA	-
ENSMUST00000241995.2	5031425E22Rik-209	1855	No protein	-	lncRNA	-
ENSMUST00000336799.1	5031425E22Rik-228	1826	No protein	-	lncRNA	-
ENSMUST00000242994.1	5031425E22Rik-214	1751	No protein	-	lncRNA	-
ENSMUST00000244275.2	5031425E22Rik-218	1747	No protein	-	lncRNA	-
ENSMUST00000336800.1	5031425E22Rik-229	1709	No protein	-	lncRNA	-
ENSMUST00000242831.2	5031425E22Rik-213	1643	No protein	-	lncRNA	-
ENSMUST00000336839.1	5031425E22Rik-268	1638	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336801.1	5031425E22Rik-230	1633	No protein	-	lncRNA	-
ENSMUST00000336798.1	5031425E22Rik-227	1614	No protein	-	lncRNA	-
ENSMUST00000244748.2	5031425E22Rik-219	1601	No protein	-	lncRNA	-
ENSMUST00000336833.1	5031425E22Rik-262	1577	No protein	-	lncRNA	-
ENSMUST00000336835.1	5031425E22Rik-264	1554	No protein	-	lncRNA	-
ENSMUST00000336804.1	5031425E22Rik-233	1499	No protein	-	lncRNA	-
ENSMUST00000242607.1	5031425E22Rik-211	1492	No protein	-	lncRNA	-
ENSMUST00000185943.2	5031425E22Rik-202	1477	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000243573.1	5031425E22Rik-216	1455	No protein	-	lncRNA	-
ENSMUST00000191186.4	5031425E22Rik-205	1393	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000336797.1	5031425E22Rik-226	1366	No protein	-	lncRNA	-
ENSMUST00000336803.1	5031425E22Rik-232	1328	No protein	-	lncRNA	-
ENSMUST00000336844.1	5031425E22Rik-273	1317	No protein	-	lncRNA	-
ENSMUST00000243676.2	5031425E22Rik-217	1271	No protein	-	lncRNA	-
ENSMUST00000336831.1	5031425E22Rik-260	1249	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336834.1	5031425E22Rik-263	1155	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336841.1	5031425E22Rik-270	1143	No protein	-	lncRNA	-
ENSMUST00000240858.2	5031425E22Rik-206	1104	No protein	-	lncRNA	-
ENSMUST00000336837.1	5031425E22Rik-266	1050	No protein	-	lncRNA	-
ENSMUST00000336842.1	5031425E22Rik-271	1045	No protein	-	lncRNA	-
ENSMUST00000336852.1	5031425E22Rik-281	1003	No protein	-	lncRNA	-
ENSMUST00000336851.1	5031425E22Rik-280	979	No protein	-	lncRNA	-
ENSMUST00000336838.1	5031425E22Rik-267	937	No protein	-	lncRNA	-
ENSMUST00000336840.1	5031425E22Rik-269	934	No protein	-	lncRNA	-
ENSMUST00000336836.1	5031425E22Rik-265	933	No protein	-	lncRNA	-
ENSMUST00000336832.1	5031425E22Rik-261	844	No protein	-	lncRNA	-
ENSMUST00000188328.2	5031425E22Rik-203	828	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000336829.1	5031425E22Rik-258	816	No protein	-	lncRNA	-
ENSMUST00000336816.1	5031425E22Rik-245	803	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336828.1	5031425E22Rik-257	785	No protein	-	lncRNA	-
ENSMUST00000336811.1	5031425E22Rik-240	733	No protein	-	lncRNA	-
ENSMUST00000336814.1	5031425E22Rik-243	724	No protein	-	lncRNA	-
ENSMUST00000336809.1	5031425E22Rik-238	710	No protein	-	lncRNA	-
ENSMUST00000244964.1	5031425E22Rik-220	704	No protein	-	lncRNA	-
ENSMUST00000336843.1	5031425E22Rik-272	697	No protein	-	lncRNA	-
ENSMUST00000245206.1	5031425E22Rik-222	694	No protein	-	lncRNA	-
ENSMUST00000336805.1	5031425E22Rik-234	683	No protein	-	lncRNA	-
ENSMUST00000336847.1	5031425E22Rik-276	681	No protein	-	lncRNA	-
ENSMUST00000336854.1	5031425E22Rik-283	676	No protein	-	lncRNA	-
ENSMUST00000336830.1	5031425E22Rik-259	648	No protein	-	lncRNA	-
ENSMUST00000245702.2	5031425E22Rik-223	644	No protein	-	lncRNA	-
ENSMUST00000242156.2	5031425E22Rik-210	636	No protein	-	lncRNA	-
ENSMUST00000336813.1	5031425E22Rik-242	627	No protein	-	lncRNA	-
ENSMUST00000336815.1	5031425E22Rik-244	619	No protein	-	lncRNA	-
ENSMUST00000336817.1	5031425E22Rik-246	603	No protein	-	lncRNA	-
ENSMUST00000336808.1	5031425E22Rik-237	587	No protein	-	lncRNA	-
ENSMUST00000336802.1	5031425E22Rik-231	582	No protein	-	lncRNA	-
ENSMUST00000336853.1	5031425E22Rik-282	581	No protein	-	lncRNA	-
ENSMUST00000336819.1	5031425E22Rik-248	565	No protein	-	lncRNA	-
ENSMUST00000336827.1	5031425E22Rik-256	561	No protein	-	lncRNA	-
ENSMUST00000336821.1	5031425E22Rik-250	545	No protein	-	lncRNA	-
ENSMUST00000336810.1	5031425E22Rik-239	536	No protein	-	lncRNA	-
ENSMUST00000336848.1	5031425E22Rik-277	530	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336818.1	5031425E22Rik-247	524	No protein	-	lncRNA	-
ENSMUST00000336807.1	5031425E22Rik-236	514	No protein	-	lncRNA	-
ENSMUST00000336812.1	5031425E22Rik-241	512	No protein	-	lncRNA	-
ENSMUST00000336820.1	5031425E22Rik-249	475	No protein	-	lncRNA	-
ENSMUST00000336850.1	5031425E22Rik-279	454	No protein	-	lncRNA	-
ENSMUST00000336823.1	5031425E22Rik-252	451	No protein	-	lncRNA	-
ENSMUST00000246706.2	5031425E22Rik-224	440	No protein	-	lncRNA	-
ENSMUST00000336806.1	5031425E22Rik-235	390	No protein	-	lncRNA	-
ENSMUST00000336822.1	5031425E22Rik-251	375	No protein	-	lncRNA	-
ENSMUST00000336849.1	5031425E22Rik-278	371	No protein	-	lncRNA	-
ENSMUST00000336845.1	5031425E22Rik-274	365	No protein	-	lncRNA	-
ENSMUST00000336825.1	5031425E22Rik-254	347	No protein	-	lncRNA	-
ENSMUST00000336824.1	5031425E22Rik-253	279	No protein	-	lncRNA	-
ENSMUST00000336826.1	5031425E22Rik-255	278	No protein	-	lncRNA	-

Gene: 5031425E22Rik ENSMUSG00000073147

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Gene: 5031425E22Rik ENSMUSG00000073147

Summary

About Us

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