Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: A730020M07Rik ENSMUSG00000044522

.

Description

RIKEN cDNA A730020M07 gene [Source:MGI Symbol;Acc:MGI:2442643]

Location

Chromosome 3: 121,428,585-121,440,104 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000349987.1	A730020M07Rik-204	913	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000196621.5	A730020M07Rik-202	2370	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000050571.10	A730020M07Rik-201	1241	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000198402.3	A730020M07Rik-203	1173	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000349995.1	A730020M07Rik-212	1023	No protein	-	lncRNA		-
ENSMUST00000349993.1	A730020M07Rik-210	979	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000349988.1	A730020M07Rik-205	954	No protein	-	lncRNA		-
ENSMUST00000349992.1	A730020M07Rik-209	877	No protein	-	lncRNA		-
ENSMUST00000349990.1	A730020M07Rik-207	842	No protein	-	lncRNA		-
ENSMUST00000349991.1	A730020M07Rik-208	824	No protein	-	lncRNA		-
ENSMUST00000349994.1	A730020M07Rik-211	820	No protein	-	lncRNA		-
ENSMUST00000349989.1	A730020M07Rik-206	763	No protein	-	lncRNA		-

.

Summary

.

.