Gene: Lars1 ENSMUSG00000024493

Description

leucyl-tRNA synthetase 1 [Source:MGI Symbol;Acc:MGI:1913808]

Gene Synonyms

2310045K21Rik, 3110009L02Rik, Lars

Location

Chromosome 18: 42,335,363-42,395,259 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 10 transcripts (splice variants), 205 orthologues, 7 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000097590.5	Lars1-201	3980	1178aa	ENSMUSP00000095197.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37796	Q7TSZ3 Q8BMJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236102.2	Lars1-204	451	99aa	ENSMUSP00000157939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA98	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000237587.2	Lars1-209	1759	213aa	ENSMUSP00000158450.2	Nonsense mediated decay		A0A494BBF9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000235432.2	Lars1-202	1672	102aa	ENSMUSP00000157918.2	Nonsense mediated decay		A0A494BA30	-
ENSMUST00000235845.2	Lars1-203	470	54aa	ENSMUSP00000157407.2	Nonsense mediated decay		A0A494B919	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000236304.2	Lars1-206	322	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000236226.2	Lars1-205	1300	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000237882.2	Lars1-210	1071	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000237520.2	Lars1-208	452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000236826.2	Lars1-207	412	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Lars1 ENSMUSG00000024493

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Gene: Lars1 ENSMUSG00000024493

Summary

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