Gene: Fgf12 ENSMUSG00000022523

Description

fibroblast growth factor 12 [Source:MGI Symbol;Acc:MGI:109183]

Gene Synonyms

Fhf1

Location

Chromosome 16: 27,978,850-28,571,820 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 6 transcripts (splice variants), 279 orthologues, 21 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000100024.3	Fgf12-201	4137	243aa	ENSMUSP00000097601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28092	P61329-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231717.2	Fgf12-204	2527	115aa	ENSMUSP00000156274.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P752	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232352.2	Fgf12-205	831	181aa	ENSMUSP00000155924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P61329-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000231399.2	Fgf12-202	801	171aa	ENSMUSP00000156108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P764	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000232632.2	Fgf12-206	2689	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000231429.2	Fgf12-203	244	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Gene: Fgf12 ENSMUSG00000022523

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Fgf12 ENSMUSG00000022523

Summary

About Us

Get help

Our sister sites

Follow us