Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm35417 ENSMUSG00000120580

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Description

predicted gene, 35417 [Source:MGI Symbol;Acc:MGI:5594576]

Location

Chromosome 6: 108,779,371-108,805,525 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 14 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000244550.2	Gm35417-202	822	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000343334.1	Gm35417-208	842	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244300.2	Gm35417-201	780	No protein	-	lncRNA		-
ENSMUST00000343335.1	Gm35417-209	737	No protein	-	lncRNA		-
ENSMUST00000343333.1	Gm35417-207	733	No protein	-	lncRNA		-
ENSMUST00000343336.1	Gm35417-210	729	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343339.1	Gm35417-213	714	No protein	-	lncRNA		-
ENSMUST00000246358.2	Gm35417-203	693	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343330.1	Gm35417-204	691	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343331.1	Gm35417-205	648	No protein	-	lncRNA		-
ENSMUST00000343332.1	Gm35417-206	629	No protein	-	lncRNA		-
ENSMUST00000343338.1	Gm35417-212	438	No protein	-	lncRNA		-
ENSMUST00000343337.1	Gm35417-211	374	No protein	-	lncRNA		-
ENSMUST00000343340.1	Gm35417-214	283	No protein	-	lncRNA		-

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Orthologues

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