Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm49431 ENSMUSG00000116130

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Description

predicted gene, 49431 [Source:MGI Symbol;Acc:MGI:6155070]

Location

Chromosome 15: 82,505,293-82,546,487 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 17 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000231012.2	Gm49431-201	401	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000240976.1	Gm49431-202	2230	No protein	-	lncRNA		-
ENSMUST00000318780.1	Gm49431-217	2229	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318766.1	Gm49431-203	2134	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318779.1	Gm49431-216	2118	No protein	-	lncRNA		-
ENSMUST00000318773.1	Gm49431-210	969	No protein	-	lncRNA		-
ENSMUST00000318767.1	Gm49431-204	852	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318770.1	Gm49431-207	808	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318769.1	Gm49431-206	789	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318772.1	Gm49431-209	749	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318771.1	Gm49431-208	660	No protein	-	lncRNA		-
ENSMUST00000318768.1	Gm49431-205	654	No protein	-	lncRNA		-
ENSMUST00000318778.1	Gm49431-215	578	No protein	-	lncRNA		-
ENSMUST00000318774.1	Gm49431-211	567	No protein	-	lncRNA		-
ENSMUST00000318776.1	Gm49431-213	522	No protein	-	lncRNA		-
ENSMUST00000318777.1	Gm49431-214	441	No protein	-	lncRNA		-
ENSMUST00000318775.1	Gm49431-212	385	No protein	-	lncRNA		-

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Orthologues

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