Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm3892 ENSMUSG00000095348

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Description

predicted gene 3892 [Source:MGI Symbol;Acc:MGI:3782065]

Gene Synonyms

100039323, Gm7819

Location

Chromosome 4: 42,054,592-42,134,385 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000107991.4	Gm3892-201	3808	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000178043.3	Gm3892-202	3548	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000370569.1	Gm3892-214	1977	No protein	-	lncRNA		-
ENSMUST00000370563.1	Gm3892-208	1391	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000370560.1	Gm3892-205	1348	No protein	-	lncRNA		-
ENSMUST00000370562.1	Gm3892-207	1156	No protein	-	lncRNA		-
ENSMUST00000370564.1	Gm3892-209	1124	No protein	-	lncRNA		-
ENSMUST00000370568.1	Gm3892-213	914	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000370567.1	Gm3892-212	816	No protein	-	lncRNA		-
ENSMUST00000370570.1	Gm3892-215	763	No protein	-	lncRNA		-
ENSMUST00000370566.1	Gm3892-211	729	No protein	-	lncRNA		-
ENSMUST00000370561.1	Gm3892-206	708	No protein	-	lncRNA		-
ENSMUST00000370565.1	Gm3892-210	593	No protein	-	lncRNA		-
ENSMUST00000370572.1	Gm3892-217	535	No protein	-	lncRNA		-
ENSMUST00000370558.1	Gm3892-203	499	No protein	-	lncRNA		-
ENSMUST00000370573.1	Gm3892-218	422	No protein	-	lncRNA		-
ENSMUST00000370559.1	Gm3892-204	393	No protein	-	lncRNA		-
ENSMUST00000370571.1	Gm3892-216	323	No protein	-	lncRNA		-
ENSMUST00000370574.1	Gm3892-219	227	No protein	-	lncRNA		-

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Orthologues

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