Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm16279 ENSMUSG00000084998

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Description

predicted gene 16279 [Source:MGI Symbol;Acc:MGI:3826576]

Location

Chromosome 17: 36,207,776-36,224,620 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 10 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000149452.2	Gm16279-201	2945	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000288569.1	Gm16279-202	1324	No protein	-	lncRNA		-
ENSMUST00000288570.1	Gm16279-203	1163	No protein	-	lncRNA		-
ENSMUST00000288575.1	Gm16279-208	1059	No protein	-	lncRNA		-
ENSMUST00000288573.1	Gm16279-206	829	No protein	-	lncRNA		-
ENSMUST00000288577.1	Gm16279-210	699	No protein	-	lncRNA		-
ENSMUST00000288576.1	Gm16279-209	695	No protein	-	lncRNA		-
ENSMUST00000288572.1	Gm16279-205	557	No protein	-	lncRNA		-
ENSMUST00000288571.1	Gm16279-204	551	No protein	-	lncRNA		-
ENSMUST00000288574.1	Gm16279-207	540	No protein	-	lncRNA		-

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Orthologues

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