Summary
- Splice variants
- Transcript comparison
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Sequence
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Comparative Genomics
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- GO: Anatomical entity
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Gene: ENSMUSG00000139650

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Description

novel transcript, antisense to Mtmr2

Location

Chromosome 9: 13,647,788-13,660,491 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000354357.1	-	1569	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000354358.1	-	1281	No protein	-	lncRNA		-
ENSMUST00000354360.1	-	1049	No protein	-	lncRNA		-
ENSMUST00000354364.1	-	1027	No protein	-	lncRNA		-
ENSMUST00000354361.1	-	962	No protein	-	lncRNA		-
ENSMUST00000354359.1	-	811	No protein	-	lncRNA		-
ENSMUST00000354362.1	-	685	No protein	-	lncRNA		-
ENSMUST00000354365.1	-	461	No protein	-	lncRNA		-
ENSMUST00000354363.1	-	432	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data