Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Gm39289 ENSMUSG00000136112

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Description

predicted gene, 39289 [Source:NCBI gene (formerly Entrezgene);Acc:105243340]

Location

Chromosome 9: 10,067,051-10,092,666 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000334206.1	Gm39289-201	757	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334208.1	Gm39289-203	667	No protein	-	lncRNA		-
ENSMUST00000334207.1	Gm39289-202	640	No protein	-	lncRNA		-
ENSMUST00000334213.1	Gm39289-208	563	No protein	-	lncRNA		-
ENSMUST00000334210.1	Gm39289-205	529	No protein	-	lncRNA		-
ENSMUST00000334209.1	Gm39289-204	489	No protein	-	lncRNA		-
ENSMUST00000334214.1	Gm39289-209	472	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334212.1	Gm39289-207	446	No protein	-	lncRNA		-
ENSMUST00000334211.1	Gm39289-206	350	No protein	-	lncRNA		-
ENSMUST00000334215.1	Gm39289-210	294	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data