Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: AV051173 ENSMUSG00000129030

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Description

expressed sequence AV051173 [Source:NCBI gene (formerly Entrezgene);Acc:100502959]

Location

Chromosome 4: 116,542,146-116,543,260 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000291332.1	AV051173-201	678	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291337.1	AV051173-206	934	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291333.1	AV051173-202	771	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291335.1	AV051173-204	710	No protein	-	lncRNA		-
ENSMUST00000291334.1	AV051173-203	659	No protein	-	lncRNA		-
ENSMUST00000291338.1	AV051173-207	609	No protein	-	lncRNA		-
ENSMUST00000291339.1	AV051173-208	518	No protein	-	lncRNA		-
ENSMUST00000291336.1	AV051173-205	409	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data