Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: AA388235 ENSMUSG00000118084

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Description

expressed sequence AA388235 [Source:MGI Symbol;Acc:MGI:3035178]

Location

Chromosome 17: 34,197,396-34,202,217 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000268837.1	AA388235-202	1698	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000268838.1	AA388235-203	2099	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000268841.1	AA388235-206	1602	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000268843.1	AA388235-208	1515	No protein	-	lncRNA		-
ENSMUST00000268839.1	AA388235-204	1494	No protein	-	lncRNA		-
ENSMUST00000268840.1	AA388235-205	1455	No protein	-	lncRNA		-
ENSMUST00000235802.3	AA388235-201	1300	No protein	-	lncRNA		-
ENSMUST00000268842.1	AA388235-207	721	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data