Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: 9130209A04Rik ENSMUSG00000117602

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Description

RIKEN cDNA 9130209A04 gene [Source:MGI Symbol;Acc:MGI:1924918]

Location

Chromosome 18: 47,585,734-47,609,547 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000334484.1	9130209A04Rik-203	1223	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234865.3	9130209A04Rik-201	1080	No protein	-	lncRNA		-
ENSMUST00000334485.1	9130209A04Rik-204	1019	No protein	-	lncRNA		-
ENSMUST00000334487.1	9130209A04Rik-206	881	No protein	-	lncRNA		-
ENSMUST00000334488.1	9130209A04Rik-207	877	No protein	-	lncRNA		-
ENSMUST00000334489.1	9130209A04Rik-208	777	No protein	-	lncRNA		-
ENSMUST00000334491.1	9130209A04Rik-210	757	No protein	-	lncRNA		-
ENSMUST00000334490.1	9130209A04Rik-209	755	No protein	-	lncRNA		-
ENSMUST00000235070.3	9130209A04Rik-202	678	No protein	-	lncRNA		-
ENSMUST00000334493.1	9130209A04Rik-212	672	No protein	-	lncRNA		-
ENSMUST00000334486.1	9130209A04Rik-205	663	No protein	-	lncRNA		-
ENSMUST00000334492.1	9130209A04Rik-211	652	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data