Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm35550 ENSMUSG00000117229

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Description

predicted gene, 35550 [Source:MGI Symbol;Acc:MGI:5594709]

Location

Chromosome 17: 66,212,469-66,223,682 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 19 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000232714.3	Gm35550-201	1220	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000290865.1	Gm35550-207	1430	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000290863.1	Gm35550-205	1293	No protein	-	lncRNA		-
ENSMUST00000290869.1	Gm35550-211	1208	No protein	-	lncRNA		-
ENSMUST00000290867.1	Gm35550-209	1160	No protein	-	lncRNA		-
ENSMUST00000290870.1	Gm35550-212	1124	No protein	-	lncRNA		-
ENSMUST00000290864.1	Gm35550-206	1090	No protein	-	lncRNA		-
ENSMUST00000290866.1	Gm35550-208	1044	No protein	-	lncRNA		-
ENSMUST00000290862.1	Gm35550-204	971	No protein	-	lncRNA		-
ENSMUST00000290868.1	Gm35550-210	917	No protein	-	lncRNA		-
ENSMUST00000290871.1	Gm35550-213	893	No protein	-	lncRNA		-
ENSMUST00000290875.1	Gm35550-217	866	No protein	-	lncRNA		-
ENSMUST00000233592.3	Gm35550-202	836	No protein	-	lncRNA		-
ENSMUST00000233760.3	Gm35550-203	822	No protein	-	lncRNA		-
ENSMUST00000290874.1	Gm35550-216	812	No protein	-	lncRNA		-
ENSMUST00000290873.1	Gm35550-215	662	No protein	-	lncRNA		-
ENSMUST00000290872.1	Gm35550-214	632	No protein	-	lncRNA		-
ENSMUST00000290876.1	Gm35550-218	579	No protein	-	lncRNA		-
ENSMUST00000290877.1	Gm35550-219	506	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data