Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Gm49618 ENSMUSG00000116681

.

Description

predicted gene, 49618 [Source:MGI Symbol;Acc:MGI:6215038]

Location

Chromosome 16: 93,777,561-93,782,409 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000342856.1	Gm49618-203	564	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342865.1	Gm49618-211	1137	No protein	-	lncRNA		-
ENSMUST00000232110.3	Gm49618-202	876	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342862.1	Gm49618-209	586	No protein	-	lncRNA		-
ENSMUST00000231886.3	Gm49618-201	554	No protein	-	lncRNA		-
ENSMUST00000342858.1	Gm49618-205	534	No protein	-	lncRNA		-
ENSMUST00000342860.1	Gm49618-207	510	No protein	-	lncRNA		-
ENSMUST00000342861.1	Gm49618-208	497	No protein	-	lncRNA		-
ENSMUST00000342866.1	Gm49618-212	494	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342863.1	Gm49618-210	474	No protein	-	lncRNA		-
ENSMUST00000342857.1	Gm49618-204	468	No protein	-	lncRNA		-
ENSMUST00000342859.1	Gm49618-206	452	No protein	-	lncRNA		-
ENSMUST00000342868.1	Gm49618-214	401	No protein	-	lncRNA		-
ENSMUST00000342869.1	Gm49618-215	371	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342870.1	Gm49618-216	322	No protein	-	lncRNA		-
ENSMUST00000342867.1	Gm49618-213	309	No protein	-	lncRNA		-

.

Strains

.

Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data