Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Gm41517 ENSMUSG00000116551

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Description

predicted gene, 41517 [Source:MGI Symbol;Acc:MGI:5624402]

Location

Chromosome 17: 4,990,630-5,018,497 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000335477.1	Gm41517-202	811	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000232522.3	Gm41517-201	1525	No protein	-	lncRNA		-
ENSMUST00000335480.1	Gm41517-205	1382	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000335486.1	Gm41517-211	1095	No protein	-	lncRNA		-
ENSMUST00000335478.1	Gm41517-203	995	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000335481.1	Gm41517-206	892	No protein	-	lncRNA		-
ENSMUST00000335479.1	Gm41517-204	778	No protein	-	lncRNA		-
ENSMUST00000335482.1	Gm41517-207	733	No protein	-	lncRNA		-
ENSMUST00000335485.1	Gm41517-210	561	No protein	-	lncRNA		-
ENSMUST00000335484.1	Gm41517-209	524	No protein	-	lncRNA		-
ENSMUST00000335483.1	Gm41517-208	472	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data