Description
RIKEN cDNA D130079A08 gene [Source:MGI Symbol;Acc:MGI:2444500]
Gene Synonyms
linc-3a
Location
Chromosome 14: 104,525,867-104,696,773 reverse strand.
GRCm39:CM001007.3
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| ENSMUST00000228095.2 | D130079A08Rik-202 | 2294 | No protein | - | lncRNA | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000228613.2 | D130079A08Rik-203 | 4192 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352861.1 | D130079A08Rik-213 | 1003 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352855.1 | D130079A08Rik-207 | 968 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000241864.1 | D130079A08Rik-204 | 942 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000227158.2 | D130079A08Rik-201 | 939 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352858.1 | D130079A08Rik-210 | 876 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000242595.1 | D130079A08Rik-205 | 705 | No protein | - | lncRNA | - | |
| ENSMUST00000352857.1 | D130079A08Rik-209 | 665 | No protein | - | lncRNA | - | |
| ENSMUST00000352854.1 | D130079A08Rik-206 | 615 | No protein | - | lncRNA | - | |
| ENSMUST00000352859.1 | D130079A08Rik-211 | 488 | No protein | - | lncRNA | - | |
| ENSMUST00000352862.1 | D130079A08Rik-214 | 443 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352863.1 | D130079A08Rik-215 | 440 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352865.1 | D130079A08Rik-217 | 416 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352856.1 | D130079A08Rik-208 | 365 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352864.1 | D130079A08Rik-216 | 325 | No protein | - | lncRNA | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENSMUST00000352860.1 | D130079A08Rik-212 | 292 | No protein | - | lncRNA | - |
