Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: Gm48917 ENSMUSG00000115421

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Description

predicted gene, 48917 [Source:MGI Symbol;Acc:MGI:6118226]

Location

Chromosome 14: 46,909,124-46,918,805 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000226186.2	Gm48917-201	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
ENSMUST00000252584.1	Gm48917-203	968	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000252587.1	Gm48917-206	1172	No protein	-	lncRNA		-
ENSMUST00000252589.1	Gm48917-208	1093	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000252592.1	Gm48917-211	895	No protein	-	lncRNA		-
ENSMUST00000227500.2	Gm48917-202	866	No protein	-	lncRNA		-
ENSMUST00000252588.1	Gm48917-207	743	No protein	-	lncRNA		-
ENSMUST00000252590.1	Gm48917-209	743	No protein	-	lncRNA		-
ENSMUST00000252586.1	Gm48917-205	660	No protein	-	lncRNA		-
ENSMUST00000252591.1	Gm48917-210	618	No protein	-	lncRNA		-
ENSMUST00000252585.1	Gm48917-204	477	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data