Summary
- Splice variants
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Comparative Genomics
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Gene: A530001N23Rik ENSMUSG00000114452

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Description

RIKEN cDNA A530001N23 gene [Source:MGI Symbol;Acc:MGI:3045361]

Location

Chromosome 13: 60,631,318-60,656,602 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000351008.1	A530001N23Rik-206	661	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000224431.2	A530001N23Rik-202	2915	No protein	-	lncRNA		-
ENSMUST00000225276.2	A530001N23Rik-203	2757	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000226114.2	A530001N23Rik-205	2676	No protein	-	lncRNA		-
ENSMUST00000224134.2	A530001N23Rik-201	1584	No protein	-	lncRNA		-
ENSMUST00000225622.3	A530001N23Rik-204	1194	No protein	-	lncRNA		-
ENSMUST00000351009.1	A530001N23Rik-207	461	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data