Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: 4930455C13Rik ENSMUSG00000112654

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Description

RIKEN cDNA 4930455C13 gene [Source:MGI Symbol;Acc:MGI:1921240]

Location

Chromosome 10: 21,168,520-21,217,981 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000343031.1	4930455C13Rik-202	1182	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000218108.2	4930455C13Rik-201	1018	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000343033.1	4930455C13Rik-204	1002	No protein	-	lncRNA		-
ENSMUST00000343034.1	4930455C13Rik-205	996	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343041.1	4930455C13Rik-212	954	No protein	-	lncRNA		-
ENSMUST00000343032.1	4930455C13Rik-203	921	No protein	-	lncRNA		-
ENSMUST00000343035.1	4930455C13Rik-206	874	No protein	-	lncRNA		-
ENSMUST00000343037.1	4930455C13Rik-208	863	No protein	-	lncRNA		-
ENSMUST00000343038.1	4930455C13Rik-209	859	No protein	-	lncRNA		-
ENSMUST00000343039.1	4930455C13Rik-210	854	No protein	-	lncRNA		-
ENSMUST00000343036.1	4930455C13Rik-207	772	No protein	-	lncRNA		-
ENSMUST00000343042.1	4930455C13Rik-213	750	No protein	-	lncRNA		-
ENSMUST00000343043.1	4930455C13Rik-214	589	No protein	-	lncRNA		-
ENSMUST00000343040.1	4930455C13Rik-211	574	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data