Gene: Gm34004 ENSMUSG00000111169

Description

predicted gene, 34004 [Source:MGI Symbol;Acc:MGI:5593163]

Location

Chromosome 9: 60,989,143-61,052,546 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 22 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000256542.1	Gm34004-204	496	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000215460.2	Gm34004-201	2837	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000256554.1	Gm34004-216	2780	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000216012.3	Gm34004-203	1962	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000256547.1	Gm34004-209	1058	No protein	-	lncRNA	-
ENSMUST00000256851.1	Gm34004-219	1036	No protein	-	lncRNA	-
ENSMUST00000256555.1	Gm34004-217	1032	No protein	-	lncRNA	-
ENSMUST00000256853.1	Gm34004-221	1008	No protein	-	lncRNA	-
ENSMUST00000256546.1	Gm34004-208	888	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000256545.1	Gm34004-207	859	No protein	-	lncRNA	-
ENSMUST00000256852.1	Gm34004-220	858	No protein	-	lncRNA	-
ENSMUST00000256551.1	Gm34004-213	829	No protein	-	lncRNA	-
ENSMUST00000215586.2	Gm34004-202	826	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000256556.1	Gm34004-218	760	No protein	-	lncRNA	-
ENSMUST00000256543.1	Gm34004-205	737	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000256544.1	Gm34004-206	713	No protein	-	lncRNA	-
ENSMUST00000256549.1	Gm34004-211	712	No protein	-	lncRNA	-
ENSMUST00000256550.1	Gm34004-212	689	No protein	-	lncRNA	-
ENSMUST00000256553.1	Gm34004-215	675	No protein	-	lncRNA	-
ENSMUST00000256854.1	Gm34004-222	631	No protein	-	lncRNA	-
ENSMUST00000256548.1	Gm34004-210	578	No protein	-	lncRNA	-
ENSMUST00000256552.1	Gm34004-214	512	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,