Gene: Gm39662 ENSMUSG00000110712

Description

predicted gene, 39662 [Source:MGI Symbol;Acc:MGI:5622547]

Gene Synonyms

Gm45835

Location

Chromosome 1: 72,680,304-72,682,437 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 10 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000212057.3	Gm39662-202	1596	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000347137.1	Gm39662-207	1609	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000211909.3	Gm39662-201	1328	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000347134.1	Gm39662-204	1263	No protein	-	lncRNA	-
ENSMUST00000347140.1	Gm39662-210	763	No protein	-	lncRNA	-
ENSMUST00000347135.1	Gm39662-205	678	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347139.1	Gm39662-209	621	No protein	-	lncRNA	-
ENSMUST00000347138.1	Gm39662-208	607	No protein	-	lncRNA	-
ENSMUST00000347133.1	Gm39662-203	594	No protein	-	lncRNA	-
ENSMUST00000347136.1	Gm39662-206	342	No protein	-	lncRNA	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Gm39662 ENSMUSG00000110712

Strains

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Gene: Gm39662 ENSMUSG00000110712

Strains

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